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Jan Krumsiek

Bioinformatics student at
Technische Universität München and
Ludwig Maximilian Unversität München
since 2004

* 1984/02/23

since 2008	Computational Modelling in Biology at the Institute for Bioinformatics and Systems Biology, HelmholtzZentrum München
2007,2008	Neural mechanisms of eye movement at Bernstein Center for Computational Neuroscience - Munich
since 2006	Protein interactions and complexes at LFE Bioinformatik, IFI, LMU Munich Web: http://www.bio.ifi.lmu.de/Complexes/
2005,2006	SIMAP - the similarity matrix of proteins at MIPS Web: http://mips.gsf.de/simap
since 2005	Gepard - a rapid dotplot software for plots on genome scale Web: http://mips.gsf.de/services/analysis/gepard

Krumsiek J, Friedel CC, Zimmer R
ProCope - Protein Complex Prediction and Evaluation.
Bioinformatics. 2008 (advanced access)
Pubmed: 18635566
Friedel CC, Krumsiek J, Zimmer R
Bootstrapping the interactome: unsupervised identification of protein complexes in yeast.
12th Annual International Conference on Research in Molecular Biology RECOMB 2008.
PDF
Rattei T, Tischler P, Arnold R, Hamberger F, Krebs J, Krumsiek J, Wachinger B, Stuempflen V, Mewes HW
SIMAP - structuring the network of protein similarities.
Nucleic Acids Res. 2007 (Database issue); in press.
Pubmed: 18037617, PDF
Krumsiek J, Arnold R, Rattei T
Gepard: A rapid and sensitive tool for creating dotplots on genome scale.
Bioinformatics 2007; 23(8): 1026-8.
Pubmed: 17309896

D.M. Wittmann, J. Krumsiek, F. Blöchl, S. Klamt, and F.J. Theis
Mind the Gap: From Boolean to Continuous Models
Status Seminar of the Helmholtz Alliance on Systems Biology, Potsdam
PDF
J. Krumsiek, D.M. Wittmann, S. Klamt, and F.J. Theis
Odefy - From discrete to continuous models in MATLAB
Status Seminar of the Helmholtz Alliance on Systems Biology, Potsdam
PDF